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Archive for April, 2008

Apr
20

Plasmid DNA on a Mineral Sheet Photo

Posted under Health Photos

Plasmid DNA on a mineral sheet, Computational simulation, Circular plasmid DNA on a mineral sheet, studied using molecular dynamics simulations to see whether the sheets can protect the DNA against extreme conditions such as those found in deep ocean hydrothermal vents. If they do it would lend support to the idea that a group of minerals called Layered Double Hydroxides could be an ideal protective and catalytic scaffold for the creation of biological molecules and hence the origin of life.

A plasmid is an extra-chromosomal DNA molecule separate from the chromosomal DNA which is capable of replicating independently of the chromosomal DNA. In many cases, it is circular and double-stranded. Plasmids usually occur naturally in bacteria, but are sometimes found in eukaryotic organisms (e.g., the 2-micrometre-ring in Saccharomyces cerevisiae).

Plasmid size varies from 1 to over 200 kilobase pairs (kbp). The number of identical plasmids within a single cell can be zero, one, or even thousands under some circumstances. Plasmids can be considered to be part of the mobilome, since they are often associated with conjugation, a mechanism of horizontal gene transfer.

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Apr
20

Human Immunodeficienncy Virus (HIV) Photo

Posted under Health Photos

Human immunodeficienncy virus (HIV) photo

Human immunodeficienncy virus (HIV), Cryo-electron tomography, Internal structure of an HIV particle showing the capsid surrounding the RNA-containing core in red and the membrane in blue. The yellow area is electron dense material, including proteases, between the core and the membrane.

Human immunodeficiency virus (HIV) is a retrovirus that can lead to acquired immunodeficiency syndrome (AIDS), a condition in humans in which the immune system begins to fail, leading to life-threatening opportunistic infections. Previous names for the virus include human T-lymphotropic virus-III (HTLV-III), lymphadenopathy-associated virus (LAV), and AIDS-associated retrovirus (ARV).

Infection with HIV occurs by the transfer of blood, semen, vaginal fluid, pre-ejaculate, or breast milk. Within these bodily fluids, HIV is present as both free virus particles and virus within infected immune cells. The four major routes of transmission are unprotected sexual intercourse, contaminated needles, breast milk, and transmission from an infected mother to her baby at birth. Screening of blood products for HIV has largely eliminated transmission through blood transfusions or infected blood products in the developed world.

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Apr
20

Molecular Model of a Ribosome Photo

Posted under Health Photos

Molecular model of a ribosome photo

Molecular model, Molecular model of a ribosome, Molecular model of a bacterial ribosome showing the RNA and protein components in the form of ribbon models. In the large (50S) subunit the 23S RNA is shown in cyan, the 5S RNA in green and the associated proteins in purple. In the small (30S) subunit the 16S RNA is shown in yellow and the proteins in orange. The three solid elements in the centre of the ribosome, coloured green, red and reddish brown are the transfer RNAs (tRNAs) in the A, P and E sites respectively. The anticodon loops of the tRNAs are buried in a cleft in the small subunit where they interact with mRNA. The other ends of the tRNA, which carry the peptide and amino acid, are buried in the peptidyl transferase centre of the large subunit, where peptide bond formation occurs.

Ribosomes (from ribonucleic acid and “Greek: soma (meaning body)”) are complexes of RNA and protein that are found in all cells. Prokaryotic ribosomes from archaea and bacteria are smaller than most of the ribosomes from eukaryotes such as plants and animals. However, the ribosomes in the mitochondrion of eukaryotic cells resemble those in bacteria, reflecting the evolutionary origin of this organelle.

The function of ribosomes is the assembly of proteins, in a process called translation. Ribosomes do this by catalysing the assembly of individual amino acids into polypeptide chains; this involves binding a messenger RNA and then using this as a template to join together the correct sequence of amino acids. This reaction uses adapters called transfer RNA molecules, which read the sequence of the messenger RNA and are attached to the amino acids.

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